KashFlow Payroll doesn't at present support CIS deductions! This is a fundamental part of any contractors monthly payroll as a subcontractor
Payroll needs to allow for CIS stoppages to be offset against PAYE so that you don't have to wait to the end of the year to reclaim CIS stoppages. Or use other software to do this job as paying for Kashflow payroll this should be an integral part of your system.
I'm surly not the only subcontractor who uses this software and is very disappointed by the primary function that is missing for our industry.